Research groups
- Mechanics and Genetics of Embryonic and Tumoral Development
- Structural analysis of membrane proteins and of biomimetic systems by electron microscopy
- Physical approach of biological problems
- Molecular and macromolecular architecture of organized fluids and interfaces
- Biomimetism of cellular movement
- RNA dynamics and biomolecular systems
- Macromolecules and Microsystems in Biology and Medicine (MMBM)
- Active mechano-sensitivity by hair cells in the inner ear
- Biology inspired physics at meso-scales
- Light-based Observation and Control of Cellular Organization (LOCCO)
- Membranes and cellular functions
- Physics of the cytoskeleton and membrane functions
- Soft interfaces
Images
- HON Logo
- RSS Feeds
- Fig. 1
- Fig. 2
- Fig.3
- Fig.4
- Fig. 1
- Fig. 2
- Fig. 1
- Fig.3
- Fig. 1
- fig2
- Fig.3
- Team D. Lévy. Functional and structural analysis of membrane proteins
- Fig. 2
- fig 3
- Fig.4
- Fig. 2
- Fig. 2
- Fig.3
- Fig. 1
- Fig. 2
- Fig.3
- fig.4
- fig1
- fig.2
- Fig.3
- fig.4
- Fig. 1
- Fig. 2
- fig 3
- fig.4
- Fig. 1
- Fig. 2
- Fig. 3
- Fig. 4
- Fig.4
- fig1
- fig 2
- fig 3
- fig1
- fig2
- fig3
- Fig 1
- Fig 2
- fig 3
- fig 4
- fig5
- Fig 1
- fig 2
- fig3
- fig 4
- Fig 1
- fig 2
- fig 3
- fig 4
- fig 5
- fig 1
- Fig 2
- FIG1
- FIG2
- fig1
- fig 2
- fig 2
- Fig 1
- fig2
- fig 3
- fig4
- fig5
- fig6
- Fig 1
- fig2
- fig3
- fig4
- fig 5
- fig 6
- Fig.1
- Fig.2
- Fig.3
- Fig.4
- fig 1
- fig 2
- fig1
- fig 2
- Fig 1
- fig 2
- fig3
- fig4
- fig1
- fig2
- fig3
- fig4
- Fig.2
- Fig.1
- Fig.2
- fig1
- fig2
- fig 3
- fig 4
- fig1
- fig2
- fig3
- fig 4
- Pr Jean-François Joanny
- Fig1 - François Amblard
- Fig2.Amblard
- Patricia Bassereau
- logo CNRS
- logo umpc
- u
- .
- equipe.isambert
- equipe.isambert1
- news 1
- coli
- concentration wave of E. coli bacteria in a microchannel
- Amphiphilic Poly(ethylene oxide)-block-poly(butadiene-graft-liquid crystal) Copolymers: Synthesis and Self-Assembly in Water
- Binding, reconstitution and 2D crystallization of membrane or soluble proteins onto functionalised lipid layer observed in situ
- collectively migrating epithelium biophys cover
- Fig 5. Non-conservation of network motifs
- Fig 4. Model of biomolecular networks under duplication-divergence evolution
- Fig 3. Whole genome duplications in evolution
- Fig 2. Novel nanostructures made of DsrA ncRNA of E.coli
- Fig 1. RNA synthetic biology
- Fig 1. RNA synthetic biology
- Fig 1. RNA synthetic biology
- Fig 4. Model of biomolecular networks under duplication-divergence evolution
- Fig 4. Model of biomolecular networks under duplication-divergence evolution
- Fig 5. Expansion of signaling networks by whole genome duplication
- Fig. 1 Motor oscillations
- Fig. 2 Tissue competition
- Fig. 2 Compétition entre tissus
- Fig. 1 Oscillations de moteurs moléculaires
- Expansion of signaling networks by whole genome duplication
- image
- Brigitte da Silva
- Giulia carzedda
- laurence turpin
- Agnes verin
- anne-christine brunet
- Aurelie
- Fahima
- John Manzi
- jean-hugues
- rémy
- benoit
- Brigitte Da Silva
- Brigitte Da Silva
- Giulia Carzedda
- Laurence Turpin
- Agnès Vérin
- Anne-Christine Brunet
- Aurélie Di Cicco
- Fahima Faqir
- Jean-Hugues Codarbox
- Rémy Fert
- Benoît Lemaire
- Giulia Carzedda
- Optical tweezer and edge fluctuation setup
- Functional and structural analysis of BmrC/BmrD abacterial heterodimeric MDR transporter
- Functional and structural analysis of BmrC/BmrD bacterial heterodimeric MDR transporter
- John Manzi
- Structural changes in liquid crystal polymer vesicles induced by temperature variation and magnetic fields
- Biocompatible gold nanorods for cancer research
- Self-assembly of amphiphilic liquid crystal block copolymers containing a cholesteryl mesogen: Effects of block ratio and solven
- Mechanical measurements of biomimetic cortex
- Bleb mechanics
- Confined Actin Gel Mechanics
- cover collective
- collective
- collective1
- collective
- collective
- Smectic polymer micellar aggregates with temperature-controlled morphologies
- Smectic polymer micellar aggregates with temperature-controlled morphologies
- Smectic polymer micellar aggregates with temperature-controlled morphologies
- Smectic polymer micellar aggregates with temperature-controlled morphologies
- C. elegans sperm cell crawling on a substrate.
- Actin filled liposome
- Actin Beads and VASP
- C. elegans sperm cells transfected with fluorescent MSP
- Multilayered liposome observed by cryoEM
- electron microscopy images
- 2D crystals of BmrC/BmrD
- 2D crystals of BmrC/BmrD, a bacterial heterodimeric ABC transporter
- Multilayered liposome obserbed by cryoEM
- 2D crystals of Light Harversting Complex, LH2, from Rba. sphaeroides
- Single particle analysis of 300kDa LH1-RC-PufX core complex of Rbs. veldkampii
- Atomic model of LH1-RC-PuhX from Rba. sphaeroides
- Atomic Model of LH1-RC-PufX from Rba. sphaeroides
- Single particle analysis by cryoElectron Microscopy of a small non symemetrical membrane protein
- 2D crystals of Light Harversting Complex, LH2, from Rba. sphaeroides
- 3D reconstruction of LH1-RC-PufX, 280 Kda, at 12 A resolution
- 3D reconstruction of LH1-RC-PufX, 280 kDa, at 12 A resolution
- 2D crystals of Light Harversting Complex, LH2, from Rba. sphaeroides
- schematic model of the coupling between the non equivalent catalytic sites of ABC transporters
- schematic model of the coupling between the non equivalent catalytic sites of ABC transporters
- schematic model of the coupling between the equivalent catalytic sites of ABC transporters
- Tubular to planar membranes upon conformational changes of BmrA, a ABC transporter
- Orientation of the Shiga toxin B subunit toward the membrane
- Pores in lipid membrane
- Functionalyzed tubes made of cerebroside lipids
- Polymersomes
- Light sensitive Polymersomes
- Tubular to planar membrane transition mediated by transmembrane protein
- Biocompatible gold nanorods for cancer research
- visuel publication
- Liposome with actin cortex aspirated in a micropipet
- Actin filled liposomes form a cortex if polymerization is activated at the membrane
- Cell fragments show spontaneous osscilation
- Symmetry breaking of the actin gel around a bead
- C. elegans embryo during ventral closure
- Figure 2
- Figure2
- TEM of gold nanorod
- Figure 1
- Figure 3
- Map Institut Curie, Circle Meeting 2012
- diffusion rotationnelle
- Karen Brémond
- Karen Brémond
- Speed and orientation in a migrating monolayer.
- stencils
- bact wave
- cells 1
- cell2
- champ vit
- stencils
- MAgnetic Tweezers
- Bassereau-group-2012
- Map_BDD_Amphi_Curie
- TEM images of block copolymer self-assemblies
- simulations modele
- LH1-RC
- LH1-RC Rba. veldkampii
- LH2 from Rba. sphaeroides
- LogoCELTISPHYBIO
- Incorporation of membrane proteins in planar lipid bilayer
- 2D crystallization by the lipid layer
- Reconstitution of membrane proteins in GUVS
Sounds
Videos
- Film 1
- Film 2
- Film 1 - C. Sykes
- Film 2 - C. Sykes
- Film 1 : Oscillations spontanées
- Film 2 - Martin
- Film 1 - Amblard
- Film 1 - Brochard
- Film 2 - Brochard
- Film 3 - Brochard
- Film 4 - Brochard
- S2 RNA regulatory module
- A2 activated S2 RNA regulatory module
- Red Blood Cell Flickering
- E. coli collective migration
- 2D crystallization of proteins onto functionalyzed lipid layer
Mechanics and Genetics of Embryonic and Tumoral Development
Group leader : Emmanuel Farge
Read the scientific activity report. (pdf 438Ko, last update 26th, march 2010)
Embryogenesis involves two main types of morphogenetic process: genetic patterning of the body plan and mechanical movements that create the physical shape of the embryo (movie 1). We know that morphogenetic movements are controlled by expression of patterned developmental genes but, conversely, might the expression of some patterning genes be modulated by mechanical forces in the developing embryo? (Fig. 1)
Fig 1: Mechanical induction of twist gene expression. Expression of the twist gene reporter complex, Twi-lacZ (green), normally restricted to the ventral side of an unconstrained Drosophila embryo (left), is induced all around the embryo when it is constrained by a uni-axial global deformation (right).
We are investigating whether the morphogenetic movements of Drosophila embryos influence expression of genes that control their development. We have discovered that, during gastrulation, the process of convergent extension - in which layers of cells intercalate (converge) and become longer (extend) - compresses the future anterior gut cells of the embryo and so induces expression of twist in these cells, which is necessary for proper formation of the anterior gut (Fig. 2).
fig2: Mechanical compression induces Twist expression in Drosophila embryos. (A) In stage 6 Drosophila embryos, stomodeal cells (red arrows) are not compressed; they are compressed at stage 7 by the anterior convergence-extension movement of ventral and, possibly, dorsal tissues (yellow arrows). (B) Twist is expressed weakly in the stomodeal cells early in stage 6 (red arrows); 10 mins after compression begins in stage 7, Twist starts to be expressed strongly. (C) Mutants in the genes bcd, nos and tsl, which do not undergo convergence-extension and so do not compress stomodeal cells, do not induce strong expression of Twist in these cells. (D) Strong expression of Twist in the stomodeal cells of mutant embryos is induced by mechanical compression of the cells by applying a 50µm point.
We have investigated the physiological function of twist mechanical induction in controlling expression of genes that govern anterior gut differentiation in living embryos, as well as the mechano-transduction mechanism involved in this specific case. We also are investigating whether mechanical forces regulate developmental genes in the embryos of other species and whether they regulate homeostatic genes in adult organs.
Specifically, we have observed the mechanical activation of the expression of twist-1 and c-myc genes that initiate the programm of tumoral progression in colon cancer, in genetcially predisposed APC+/-pre-tumoral mice tisues (Fig. 3)
fig3: Hydrodynamic simulation of drosophila embryo mesoderm invagination. a At time zero, the acto-myosin apical tension is increased at apical membranes (external membranes) in ventral mesoderm cells (the 7 upper cells in the simulation), in response to the increase of Myosin-II apical concentration regulated by the transduction pathway involving Dorsal, Twist and Snail. b The mechanical and hydrodynamics response of the all embryo is mesoderm invagination. The simulation describes individual cells, with membranes and junctions as sub-cellular mechanical structures. Subcellulalr movements of apical membrane flattening, apical movements of adherens junctions, apical constriction, invaginating cells elongation and subsequent shortering, experimentally observed, are predicted by the simulation. As well as the formation of a ventro-dorsal thickness gradient. Such multi-scale simulation suggests that mesoderm invagination, with the associated cascade of sub-cellular movements experimentally observed, are the consequences of a unique genetically controlled event: the increase of ventral cells apical tension.
Initially, we used several complementary approaches, including cell biology, which led us to propose a mechanism for mechano-transduction in which membrane tension modulates the endocytosis of signalling proteins, causing strong modulation of downstream gene expression (Fig. 4).
fig4: snail mutant embryos (left) lack the apical redistribution of Myo-II that generates mesoderm invagination in the wild type. Both Myo-II apical redistribution and mesoderm invagination can be rescued by a soft indent in the mesoderm (right), in a Fog dependent mechano-transduction process.
We are working on mechanical signaling in the activation of Myosine-II dependent mesoderm invagination in early Drosophila embryos, and its dependence of Fog endocytosis mechanical inhibition (Fig. 5).
fig 5: Uni-axial deformation quantitatively mimicking intestinal pressure induces c-Myc (cell division) and Twist (cell invasivity) expression in APC+/- heterozygous pre-tumourous tissue (i.e in tissues genetically altered, but without tumour formation).
We are now studying other mechanisms by which mechanical cues from gastrulation might activate master genes protein product that control active multi-cellular morphogenetic movements and the formation of primitive organs. Our goal is to investigate if, and how, the macroscopic mechanics of a tissue contribute to the regulation of genes involved at the microscopic level in the morphogenesis of the tissue. In parallel, we develop numerical simulations of the Drosophila embryo gastrulation, to characterize in a quantitative way the biomechanical parameters of morphogenetic movements (Fig. 6 and movie 2).
fig 6: Enhancement of JunB expression in response to membrane tension inhibits BMP2 endocytosis. The images show immunofluorescence microscopy of BMP2 (a and b) and JunB (c and d) in a mouse myoblast cell line, C2C12. (a) After 10 mins of endocytosis, the signalling protein BMP2 has accumulated inside the cell. (b) Increased membrane tension induced by osmotic shock blocks BMP2 endocytosis and, after 10 mins, the protein remains on the cell surface. (c) BMP2-dependent expression of JunB in cell nuclei 30 mins after incubation of the cells with BMP2. (d) Increased expression of JunB in cell nuclei 30 mins after inhibiting endocytosis by osmotic shock and incubating the cells with BMP2. Blocking endocytosis prevents the internalisation and degradation of BMP2 and thus increases signalling by the BMP2-bound receptor on the cell surface, so stimulating JunB expression.



